Publications

Covers

Publications

2021

Recurrent dynamics of rupture transitions of giant lipid vesicles at solid surfaces

Viviane N. Ngassam*, Wan-Chih Su*, Douglas L.Gettel, Yawen Deng, Zexu Yang, Neven Wang-Tomic, Varun P. Sharma, Sowmya Purushothaman, Atul N. Parikh, Biophysical Journal, In Press, 2021

2020

Discovery and mechanistic characterization of a structurally-unique membrane active peptide

Shivani Bansal, Wan-Chih Su, Madhu Budamagunta, Wenwu Xiao, Yousif Ajena, Ruiwu Liu, John C. Voss, Randy P. Carney, Atul N. Parikh, Kit S. Lam, Biochimica et Biophysica Acta (BBA) - Biomembranes 1862, 183394, 2020

Topography-driven shape, spread, and retention of leaf surface water impacts microbial dispersion and activity in the phyllosphere

Hung Doan, Viviane Ngassam, Sean Gilmore, Robin Tecon, Atul Parikh, and Johan Leveau, Phytobiomes Journal 4, 268-280, 2020

Leaf Surface Topography Contributes to the Ability of Escherichia coli on Leafy Greens to Resist Removal by Washing, Escape Disinfection With Chlorine, and Disperse Through Splash

Hung Doan, María L. Antequera-Gómez, Atul N. Parikh, and Johan H. L. Leveau, Frontiers in Microbiology 11, Art. 1485, 2020

Coupled Membrane Lipid Miscibility and Phosphotyrosine-Driven Protein Condensation Phase Transitions

Jean K Chung, William Y C Huang, Catherine B Carbone, Laura M Nocka, Atul N Parikh, Ronald D Vale, Jay T Groves, Biophysical Journal 119, 1-9, 2020

Interactions of different lipoproteins with supported phospholipid raft membrane (SPRM) patterns to understand similar in-vivo processes

Annapoorna R. Sapuri-Butti*, Limin Wang, Sarada D.Tetali, John C. Rutledge, Atul N. Parikh, Biochimica et Biophysica Acta-Biomembranes In press, 2020

Crystallization of Cholesterol in Phospholipid Membranes Follows Ostwald’s Rule of Stages

Soohyun Park, Tun Naw Sut, Gamaliel Junren Ma, Atul N Parikh, Nam-Joon Cho, Journal of the American Chemical Society 142, 21872−21882, 2020

2019

Response of microbial membranes to butanol: interdigitation vs. disorder

Jingjing Guo, James C. S. Ho, Hokyun Chin, Alan E. Mark, Cheng Zhou, Staffan Kjelleberg, Bo Liedberg, Atul N. Parikh, Nam-Joon Cho, Jamie Hinks, Yuguang Mu* and Thomas Seviour*, Phys. Chem. Chem. Phys 21, 11903-11915, 2019

Minimal Reconstitution of Membranous Web Induced by a Vesicle-Peptide Sol-Gel Transition

James C. S. Ho, Christoph Steininger, Shu Hui Hiew, Min Chul Kim, Erik Reimhult, Ali Miserez, NamJoon Cho, Atul N. Parikh, and Bo Liedberg, Biomacromolecules, 20, 1709-1718, 2019

Cover

A Chain‐Elongated Oligophenylenevinylene Electrolyte Increases Microbial Membrane Stability

Cheng Zhou, Geraldine W. N. Chia, James C. S. Ho, Alex S. Moreland, Thomas Seviour, Bo Liedberg, Atul N. Parikh, Staffan Kjelleberg, Jamie Hinks, Guillermo C. Bazan, Advanced Materials (Communication) 1808021, 2019

Biologically inspired far-from equilibrium materials

Mohan Srinivasarao, Germano S. Iannacchione, and Atul N. Parikh, MRS Bulletin 44, 91-95, 2019

Guest Editorial | Cover

One-Step Assembly of TiO2–Liposomes Based on Interfacial Sol–Gel Process within Lipid Bilayers

Rui Zhang, Xuefei Li, Meijing Li, Xiaobang Liu, Shukun Shen*, Jian-Gang Chen, Daodao Hu, Atul Parikh, and Yajun Zhou, Langmuir 35, 7018−7025, 2019

2018

Permeability and line tension dependent response of polyunsaturated membranes to osmotic stresses

Shiva Emami*, Wan-Chih Su*, Sowmya Purushothaman, Viviane N. Ngassam, and Atul N. Parikh, Biophysical Journal 115, 1942-1955, 2018

Web Banner

Carbon nanotube porins in amphiphilic block-copolymers as fully-synthetic mimics of biological membranes

Jeremy R. Sanborn, Xi Chen, Yun-Chiao Yao, Joshua A. Hammons, Ramya H. Tunuguntla, Yuliang Zhang, Christina C. Newcomb, Jennifer A. Soltis, James J. De Yoreo, Anthony Van Buuren, Atul N. Parikh, Aleksandr Noy,Advanced Materials (Communication) 30, 1803355, 2018

Inside Cover

Engineering the interface between lipid membranes and nanoporous gold: A study by quartz crystal microbalance with dissipation monitoring

Patricia Losada-Pérez, Ozge Polat, Atul N. Parikh, Erkin Seker, and Frank Uwe Renner, Biointerphases 13, 011002.1-011002.8, 2018

Pulsatile Gating of Giant Vesicles Containing Macromolecular Crowding Agents induced by Colligative Non-ideality

Wan-Chih Su*, Doug L. Gettel*, Morgan Chabanon*, Padmini Rangamani, Atul N. Parikh, Journal of the American Chemical Society 140, 2, 691-699, 2018

2017

HDL Glycoprotein Composition and Site-Specific Glycosylation Differentiates Between Clinical Groups and Affects IL-6 Secretion in Lipopolysaccharide-Stimulated Monocytes

M. Sridevi Krishnan, Michiko Shimoda, Romina Sacchi, Muchena J. Kailemia, Guillaume Luxardi, George A. Kaysen, Atul N. Parikh, Viviane N. Ngassam, Kirsten Johansen, Glenn M. Chertow, Barbara Grimes, Jennifer T. Smilowitz, Emanual Maverakis, Carlito B. Lebrilla, Angela M. Zivkovic, Scientific Reports 7:43728, 2017

Spontaneous formation of nanometer scale tubular vesicles in aqueous mixtures of lipid and block copolymer amphiphiles

Seng Koon Lim, Andrew Wong, Hans-Peter Michael De Hoog,Padmini Rangamani, Atul Parikh, Madhavan Nallani,Sara Sandin and Bo Liedberg, Soft Matter 13, 1107-1115, 2017

Cover

Pulsatile lipid vesicles under osmotic stress

Morgan Chabanon, James C.S. Ho, Bo Liedberg, Atul N. Parikh, Padmini Rangamani, Biophysical Journal 112, 1682–1691, 2017

Cover

2016

Spontaneous vesiculation and pH-induced disassembly of a lysosomotropic detergent: impacts on lysosomotropism and lysosomal delivery

Ana María Villamil Giraldo, Timmy Fyrner, Stefan Wennmalm, Atul N. Parikh, Karin Ollinger, and Thomas Ederth Langmuir 32, 13566-13575 2016

Brownian Dynamics of Electrostatically Adhering Nano-Vesicles on a Membrane Surface Induces Domains and Probes Viscosity

Seyed R. Tabaei, Jurriaan J. J. Gillissen, Min Chul Kim, James Ho C.S., Bo Liedberg, Atul N. Parikh, Nam-Joon Cho, Langmuir 32,5445–5450, 2016

Continuity of Monolayer-Bilayer Junctions for Localization of Lipid Raft Microdomains in Model Membranes

Yong-Sang Ryu, Nathan J. Wittenberg, Jeng-Hun Suh, Sang-Wook Lee, Youngjoo Sohn, Sang-Hyun Oh, Atul N. Parikh, and Sin-Doo Lee, Scientific Reports 6, Art. No. 26823, 2016

Cholesterol Partition and Condensing Effect in Phase Separated Ternary Mixture Lipid Multilayers

Yicong Ma, Sajal K. Ghosh, David A. Dilena, Sambhunath Bera, Laurence B. Lurio, Atul N. Parikh, Sunil K. Sinha, Biophysical Journal 100, 1355–1366, 2016

Mixing Water, Transducing Energy, Shaping Membranes: Autonomously Self-regulating Giant Vesicles

James Ho C. S., Padmini Rangamani, Bo Liedberg, Atul N. Parikh, Langmuir 32, 2151–2163, 2016

Feature Article | Cover

Cholesterol-enriched domain formation induced by viral-encoded, membrane active amphipathic peptide

Joshua M. Hanson*, Douglas L. Gettel*, Seyed R. Tabaei, Joshua Jackman, Min Chul Kim, Darryl Y. Sasaki, Jay T. Groves, Bo Liedberg, Nam-Joon Cho, Atul N. Parikh (*, Equal First Authors), Biophysical Journal 110, 176-187, 2016

EurekAlert!

2015

Protein receptor-independent plasma membrane remodeling by HAMLET, a tumoricidal protein-lipid complex

Aftab Nadeem, Jeremy Sanborn, Douglas L. Gettel, James Ho C. S., Anna Rydström, Viviane N. Ngassam, Thomas Kjær Klausen, Stine Falsig Pedersen, Matti Lam, Atul N. Parikh, Catharina Svanborg, Scientific Reports 5, Art. 16432, 2015

Medium Matters: Order through fluctuations?

Atul N. Parikh, Biophysical Journal 108, 2751-2753, 2015

Commentary, New and Notable

A New Route to Liposil Formation by an Interfacial Sol-gel Process Confined by Lipid Bilayer

Shukun Shen, Lu Yang, Yaxing Lu, Jian-Gang Chen, Shaofei Song, Daodao Hu, and Atul N. Parikh, ACS Appl. Mater. Interfaces 7, 25039-25044, 2015

Lipid Membrane Deformation Accompanied by Disk-to-Ring Shape Transition of Cholesterol-rich Domains

Yong-Sang Ryu, Daehan Yoo, Nathan J Wittenberg, Luke R. Jordan, Sin-Doo Lee, Atul N. Parikh, and Sang-Hyun Oh Journal of the American Chemical Society (Communication) 137, 8692–8695, 2015

Influence of Vesicle Size and Aqueous Solvent on Intact Phospholipid Vesicle Adsorption on Oxidized Gold Monitored Using Attenuated Total Reflectance Fourier Transform Infrared Spectroscopy

Elyse N. Towns, Atul N. Parikh, and Donald P. Land, Journal of Physical Chemistry C 119, 2412-2418, 2015

2014

Characterization of Buried Metal-Molecule-Metal Junctions Using Fourier Transform Infrared Microspectroscopy

Christopher B. Babayco, Donald P. Land, Atul N. Parikh, and Richard A. Kiehl, Review of Scientific Instruments 85, 094103, 2014

Analysis of lipid phase behavior and protein conformational changes in nanolipoprotein particles upon entrapment in sol-gel derived silica

Wade F Zeno, Silvia Hilt, Kannan K Aravagiri, Subhash Risbud, John C. Voss, Atul N. Parikh, and Marjorie L. Longo Langmuir 30, 9780-9788, 2014

Reconstituting ring-rafts in bud-mimicking topography of model membranes

Yong-Sang Ryu, In-Ho Lee, Jeng-Hun Suh, Seung Chul Park, Soojung Oh, Luke R. Jordan, Nathan J. Wittenberg, Sang-Hyun Oh, Noo Li Jeon, Byoungho Lee, Atul N. Parikh, Sin-Doo Lee, Nature Communications 5, Art. No. 4507, 2014

Mixing, diffusion, and percolation in binary supported membranes containing mixtures of lipids and amphiphilic block copolymers

Douglas L. Gettel, Jeremy Sanborn, Mira Patel, Hans-Peter de Hoog, Bo Liedberg, Madhavan Nallani, and Atul N. Parikh, Journal of the American Chemical Society (communication) 136, 10186–10189, 2014

Thermal annealing triggers collapse of biphasic supported lipid bilayers into multilayer islands

Sean F. Gilmore, Darryl Y. Sasaki, and Atul N. Parikh, Langmuir 30, 4962–4969, 2014

On-demand self-assembly of supported membranes using sacrificial, anhydrobiotic sugar coats

Thomas Wilkop, Jeremy Sanborn, Ann E. Oliver, Joshua M. Hanson, and Atul N. Parikh, Journal of the American Chemical Society (communication) 136, 60–63, 2014

Third-Party ATP Sensing in Polymersomes: A Label-Free Assay of Enzyme Reactions in Vesicular Compartments

Umit Hakan Yildiz , Hans-Peter M. De Hoog , Zhikang Fu , Nikodem Tomczak, Atul N. Parikh , Madhavan Nallani , and Bo Liedberg Small 10, 442–447, 2014

Cover

Observation of stripe superstructure in the beta-two-phase co-existence region of cholesterol-phospholipid mixtures in supported membranes

Seyed R. Tabaei, Joshua A. Jackman, Bo Liedberg, Atul N. Parikh, Nam-Joon Cho, Journal of the American Chemical Society (communication) 136, 16962–16965, 2014

Oscillatory phase separation in giant lipid vesicles induced by transmembrane osmotic differentials

Kamila Oglecka, Padmini Rangamani, Bo Liedberg, Rachel S Kraut, Atul N Parikh, eLife 3, e03695, 2014

Banner

Formation of Cholesterol-Rich Supported Membranes Using Solvent-Assisted Lipid Self-Assembly

Seyed R. Tabaei, Joshua A Jackman, Seong-Oh Kim, Bo Liedberg, Wolfgang Knoll, Atul N. Parikh, and Nam-Joon Cho, Langmuir 30, 13345–13352, 2014

2013

Lithographically-defined macroscale modulation of lateral fluidity and phase separation realized via patterned nanoporous silica supported phospholipid bilayers

Eric L. Kendall, Viviane N. Ngassam, Sean F. Gilmore, C. Jeff Brinker, and Atul N. Parikh, Journal of the American Chemical Society (communication) 135,15718–15721, 2013

Interaction of sphingomyelinase with sphingomyelin-containing supported membranes

Viviane N. Ngassam, Ann E. Oliver, Phuong N. Dang, Eric L. Kendall, Sean F. Gilmore, and Atul N. Parikh, Soft Matter 9, 10413-10420, 2013

Hybrid, nanoscale phospholipid/block copolymer vesicles

Seng Koon Lim, Hans-Peter de Hoog, Atul N. Parikh, Madhavan Nallani, Bo Liedberg, Polymer 5, 1102-1114, 2013

Evolution of Conformational Order During Self-Assembly of n-Alkanethiols on Hg Droplets: An Infrared Spectro-microscopy Study

Christopher Babayco, Pauline Chang, Donald P. Land, Richard A. Kiehl, and Atul N. Parikh, Langmuir 29, 8203-8207, 2013

The role of squalene in the organization of monolayers derived from lipid extracts of Halobacterium salinarum

Sean F. Gilmore, Andrew Yao, Zipora Tietel, Tobias Kind, Marc Facciotti, and Atul N. Parikh, Langmuir 29, 7922–7930, 2013

Lipid Membrane Domains for the Selective Adsorption and Surface Patterning of Conjugated Polyelectrolytes

Darryl Y. Sasaki, Nicole Zawada, Sean F. Gilmore, Prihatha Narasimmaraj, Mari Angelica A. Sanchez, Jeanne C. Stachowiak, Carl C. Hayden, Hsing-Lin Wang, Atul N. Parikh, and Andrew P. Shreve, Langmuir 29, 5214–5221, 2013

Transient pearling and vesiculation of membrane tubes under osmotic gradients

Jeremy Sanborn, Kamila Oglecka, Rachel S. Kraut, Atul N. Parikh, Faraday Discussions 161, 167-176, 2013

Interlamellar Organization of Phase Separated Domains in Multi-Component Lipid Multilayers: Energetic Considerations

Lobat Tayebi*, Atul Parikh, Daryoosh Vashaee* Int. J. Mol. Sci. 14, 3824-3833, 2013

2012

Characterization of Structural Configuration of Myelin Figures Using Fluorescence Microscopy

Lobat Tayebi, Masoud Mozafari, Daryoosh Vashaee, and Atul N. Parikh, International Journal of Photoenergy 2012 Art. No. 685617, 2012

The Influence of Spin-Labeled Fluorene Compounds on the Assembly and Toxicity of the A-beta Peptide

Jitka Petrlova, Tamás Kálai, Izumi Maezawa, Robin Altman, Ghimire Harishchandra, Hyun-Seok Hong, Daniel A. Bricarello, Atul N. Parikh, Gary A. Lorigan, Lee-Way Jin, Kálmán Hideg, John C. Voss, Plos ONE 7, e35443, 2012

Osmotic Gradients Induce Bio-reminiscent Morphological Transformations in Giant Unilamellar Vesicles

Kamila Oglecka, Jeremy Sanborn, Atul N. Parikh, Rachel S. Kraut, Frontiers in Membrane Physiology and Biophysics 3, Art. 120, 1-11, 2012

Preparation, Characterization, and Surface Immobilization of Native Vesicles Obtained by Mechanical Extrusion of Mammalian Cells

Huawen Wu, Ann E. Oliver, Viviane N. Ngassam, Chanel K. Yee, Atul N. Parikh, Yin Yeh, Integrative Biology 4, 685-692, 2012

The Use of Attenuated Total Reflectance Fourier Transform Infrared Spectroscopy to Monitor the Development of Lipid Aggregate Structures

Mateo Hernandez, Elyses Towns, Brian Walsh, Richard Osibanjo, Atul Parikh, and Donald Land, Applied Optics 51, 2842-2846, 2012

A Comparison of Detergent Action on Supported Lipid Monolayers and Bilayers

Viviane N. Ngassam, Michael C. Howland, Annapoorna Sapuri-Butti, Nathan Rosidi, Atul N. Parikh, Soft Matter 8, 3734-3738, 2012

Use of attenuated total reflectance Fourier transform infrared spectroscopy to study lactosylceramide and GD3 DMPC bilayers

Mateo Hernandez, Elyse Towns, Jessica Moore, Hyeyoung Lee, Bruce German, Carlito Lebrilla, Atul N. Parikh, Donald P. Land, Colloids and Surfaces B: Biointerfaces 94, 374-377 (2012)